Transposable Element Search


Perc Div               Query Sequence               Repeat Class Family                   




S.No.Perc DivPerc DelPerc InsQuery SequencePosition BeginPosition EndQuery (Left)Matching RepeatRepeat Class FamilyPosition Begin2Position End2Repeat
1
30.54.53.7000400F_pilon41264404126572-630811rnd-5_family-4744Unknown24126572-429
2
260.70000400F_pilon41266374126782-630601rnd-6_family-15851Unknown041267821155
3
20.616.81.1000400F_pilon41267604127520-629863rnd-6_family-3933Unknown24127520-3
4
27.623.5000400F_pilon41279044128106-629277rnd-5_family-4744Unknown3214128106-44
5
9.100000400F_pilon41293914129414-627969(A)nSimple_repeat141294140
6
23.302.4000400F_pilon41294154129433-627950A-richLow_complexity141294330
7
14.904.3000400F_pilon41295194129567-627816rnd-5_family-472Unknown-84129567178
8
16.80.70000400F_pilon41295324129674-627709rnd-5_family-2291Unknown14129674-4
9
16.87.95000400F_pilon41303624131823-625560rnd-5_family-8203Unknown041318232266
10
12.22.31.4000400F_pilon41318514133218-624165rnd-3_family-43LTR/Gypsy6064133218-4137
11
19.22.81.7000400F_pilon41332204137854-619529rnd-3_family-43LTR/Gypsy314137854-6468
12
143.31.4000400F_pilon41378554139116-618267rnd-6_family-9738LTR/Gypsy041391163393
13
17.63.53.3000400F_pilon41390784139617-617766rnd-5_family-8203Unknown-149441396171735
14
25.68.37.9000400F_pilon41393024141088-616295rnd-5_family-252Unknown22624141088-1
15
20.27.21.1000400F_pilon41412354141484-615899rnd-6_family-13913Unknown1164141484-161
16
9.6022.7000400F_pilon41414824141535-615848rnd-6_family-13913Unknown2704141535-228
17
21.329.52.3000400F_pilon41424814142619-614764rnd-6_family-4371DNA/CMC-EnSpm041426192517
18
14.261.1000400F_pilon41426124143295-614088rnd-6_family-4373DNA/CMC-EnSpm-44344143295149
19
12.550000400F_pilon41432964143335-614048rnd-4_family-786DNA/CMC-EnSpm-919341433351376
20
13.35.40.4000400F_pilon41433854143626-613757rnd-4_family-786DNA/CMC-EnSpm-923441436261123
21
11.706.7000400F_pilon41436254143688-613695rnd-6_family-4925Unknown04143688418
22
12.54.82.9000400F_pilon41436844144285-613098rnd-4_family-786DNA/CMC-EnSpm-9942414428556
23
25.7325.6000400F_pilon41441224144388-612995rnd-6_family-12486Unknown69241443880
24
13.51.52.5000400F_pilon41444534144650-612733rnd-6_family-7336Unknown684144650-228
25
15.93.60.9000400F_pilon41453784145599-611784rnd-6_family-7336Unknown-203414559961
26
10.30.76.6000400F_pilon41458734146162-611221rnd-5_family-922Unknown-29841461621933
27
17.27.52.6000400F_pilon41463894148291-609092rnd-5_family-4092Unknown-584148291746
28
21.18.32.5000400F_pilon41490914149537-607846rnd-6_family-13164Unknown14149537-238
29
21.41.11.1000400F_pilon41495844149673-607710rnd-6_family-165Unknown04149673500
30
141.31.8000400F_pilon41496804150064-607319rnd-4_family-1435Unknown041500641892
31
18.22.14.3000400F_pilon41501404150187-607196(CACCTC)nSimple_repeat141501870
32
14.600000400F_pilon41532264153307-604076rnd-4_family-753Unknown14153307-272
33
20.97.52.9000400F_pilon41571404158020-599363rnd-4_family-404Unknown-5604158020316
34
17.44.412.1000400F_pilon41580284158276-599107rnd-5_family-6650Unknown-33941582762867
35
30.142.5000400F_pilon41583694158800-598583rnd-5_family-6650Unknown-58341588002630
36
21.162.5000400F_pilon41589134159925-597458rnd-5_family-252Unknown1194159925-1462
37
10.81.610.8000400F_pilon41601754160433-596950rnd-6_family-40682Unknown-34160433667
38
22.17.82.5000400F_pilon41602794160547-596836rnd-4_family-786DNA/CMC-EnSpm554160547-10273
39
16.34.31000400F_pilon41605464160731-596652rnd-4_family-786DNA/CMC-EnSpm4404160731-9979
40
12.99.20.8000400F_pilon41607284160836-596547rnd-4_family-786DNA/CMC-EnSpm4564160836-10037
41
4.200000400F_pilon41608634160910-596473rnd-4_family-786DNA/CMC-EnSpm4114160910-10152
42
5.56.56.5000400F_pilon41609424161018-596365rnd-4_family-786DNA/CMC-EnSpm6094161018-9925
43
13.304.4000400F_pilon41610444161161-596222rnd-4_family-786DNA/CMC-EnSpm13374161161-9161
44
7.900000400F_pilon41611974161272-596111rnd-6_family-4373DNA/CMC-EnSpm27284161272-2496
45
17.612.511.8000400F_pilon41612744162649-594734rnd-6_family-4373DNA/CMC-EnSpm37884162649-128
46
4.60.81.3000400F_pilon41626534163897-593486rnd-5_family-4070Unknown54163897-12
47
21.514.92000400F_pilon41638944164142-593241rnd-4_family-786DNA/CMC-EnSpm103064164142-2
48
294.57.2000400F_pilon41641474164302-593081rnd-5_family-252Unknown14264164302-2480
49
26.66.96.9000400F_pilon41643394164729-592654rnd-5_family-252Unknown15104164729-2157
50
25.25.65.6000400F_pilon41647054164718-592665rnd-5_family-871Unknown-13441647181097
51
12.55.25.4000400F_pilon41647194165452-591931rnd-4_family-213LTR/Gypsy14165452-3729
52
19.24.31.6000400F_pilon41654534166006-591377rnd-4_family-213LTR/Gypsy14166006-3894
53
23.85.36.2000400F_pilon41657224166080-591303rnd-5_family-2273Unknown-9541660801
54
16.22.51.5000400F_pilon41660834169540-587843rnd-4_family-474LTR/Gypsy141695400
55
12.70.50.2000400F_pilon41695434171232-586151rnd-5_family-902LTR/Gypsy24171232-1246
56
15.65.118.7000400F_pilon41712234171458-585925rnd-6_family-727Unknown14171458-536
57
15.701.4000400F_pilon41718574171927-585456rnd-6_family-727Unknown6574171927-19
58
205.12.8000400F_pilon41719464172378-585005rnd-3_family-207LTR/Gypsy2504172378-6371
59
19.80.63.5000400F_pilon41724374172614-584769rnd-5_family-2114LTR/Gypsy14172614-3833
60
18.16.20.8000400F_pilon41726114173471-583912rnd-6_family-3444Unknown314173471-55
61
11.201.1000400F_pilon41745984174687-582696rnd-5_family-291Unknown04174687152
62
15.79.61.8000400F_pilon41767424176845-580538rnd-5_family-2041Unknown344176845-634
63
60.63.9000400F_pilon41779284178271-579112rnd-4_family-123Unknown141782710
64
18.52.41.2000400F_pilon41802204180301-577082rnd-5_family-2041Unknown5674180301-130
65
17.20.79.2000400F_pilon41803494180489-576894rnd-5_family-2041Unknown65041804890
66
23.97.52.1000400F_pilon41804984180724-576659rnd-5_family-395Unknown-9074180724599
67
19.64.71.8000400F_pilon41805334180745-576638rnd-5_family-902LTR/Gypsy20944180745-630
68
19.615.12.5000400F_pilon41808124181313-576070rnd-5_family-1947Unknown5984181313-1823
69
20.681.5000400F_pilon41809774181351-576032rnd-5_family-902LTR/Gypsy25154181351-29
70
1000000400F_pilon41815014181540-575843rnd-3_family-122LTR/Gypsy124944181540-1051
71
17.3519.6000400F_pilon41815244181761-575622rnd-6_family-727Unknown14181761-536
72
12.34.51.5000400F_pilon41821504182215-575168rnd-6_family-727Unknown6774182215-1
73
23.87.25.5000400F_pilon41822334183020-574363rnd-3_family-207LTR/Gypsy3604183020-5952
74
19.75.83.4000400F_pilon41830214184915-572468rnd-6_family-8074LTR/Gypsy16814184915-1176
75
19.23.41.3000400F_pilon41848584185005-572378rnd-5_family-2273Unknown-9541850053
76
14.63.44.5000400F_pilon41850104185661-571722rnd-4_family-474LTR/Gypsy14185661-2094
77
13.51.41.9000400F_pilon41856664186284-571099rnd-4_family-213LTR/Gypsy7404186284-3108
78
25.61.95.5000400F_pilon41870584187264-570119rnd-5_family-252Unknown24234187264-1435
79
10.20.24.8000400F_pilon41872834188084-569299rnd-4_family-463Unknown24188084-2
80
26.13.710.4000400F_pilon41887194189360-568023rnd-5_family-8203Unknown-316341893604
81
25.72.24.1000400F_pilon41895724189794-567589rnd-6_family-6076Unknown1754189794-417
82
18.11.92.2000400F_pilon41898304190169-567214rnd-4_family-793Unknown34190169-1
83
34.71.52.3000400F_pilon41901704190183-567200rnd-5_family-922Unknown-17984190183657
84
24.700000400F_pilon41901844190280-567103rnd-6_family-6076Unknown4484190280-266
85
34.71.52.3000400F_pilon41902814190299-567084rnd-5_family-922Unknown-17984190299578
86
1212.55.3000400F_pilon41903574190444-566939rnd-6_family-6076Unknown7014190444-16
87
29.54.712.9000400F_pilon41904724190747-566636rnd-5_family-922Unknown-224841907471
88
22.20.48.4000400F_pilon41921124192367-565016rnd-6_family-9758Unknown44404192367-153
89
23.96.70000400F_pilon41923884192521-564862rnd-5_family-582Unknown14192521-219
90
291.56.9000400F_pilon41924614192597-564786rnd-6_family-51DNA/PIF-Harbinger-5341925973306
91
21.93.63.6000400F_pilon41926414192834-564549rnd-5_family-582Unknown16941928340
92
11.20.511.1000400F_pilon41930944193293-564090rnd-5_family-917Unknown14193293-67
93
10.403.1000400F_pilon41939214193953-563430(TA)nSimple_repeat141939530
94
13.700000400F_pilon41941814194204-563179(TGCA)nSimple_repeat141942040
95
4.904.5000400F_pilon41954294195451-561932(AAAC)nSimple_repeat141954510
96
25.12.11.1000400F_pilon41956464195834-561549rnd-6_family-482Unknown24195834-738
97
32.72.91000400F_pilon41959914196092-561291rnd-6_family-482Unknown6214196092-206
98
13.64.51.7000400F_pilon41961084197246-560137rnd-6_family-9246Unknown-641972467
99
19.600000400F_pilon41972304197275-560108rnd-6_family-8611Unknown14197275-216
100
10.81.24.5000400F_pilon41972794197529-559854rnd-5_family-4400Unknown14197529-317
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